Index

A

add_data() (ReconFileWriter method) all_match() (in module PICOcode.ProcessingScripts.merge_files)

apply_common_cuts() (in module PICOcode.AnalysisModules.pico40l_cuts) ApplyPerspectiveTransform() (in module PICOcode.AnalysisModules.run_modules.XYZlookup) archive() (GitUpdater method)

B

BinaryData (class in PICOcode.DataHandling.BinaryData) BinaryLUT (class in PICOcode.DataHandling.BinaryLUT) blockDownsample() (DytranAnalysisBase static method)

blockSmooth() (DytranAnalysisBase static method) BubbleFinder() (in module PICOcode.AnalysisModules.run_modules.XYZlookup) build_or_rebuild_code() (in module PICOcode.ProcessingScripts.process_utilities)

C

cast_array() (in module PICOcode.DataHandling.Utilities) cast_value() (in module PICOcode.DataHandling.Utilities) cast_value_mappable() (in module PICOcode.DataHandling.Utilities) check_commits() (GitUpdater method) check_dir() (in module PICOcode.ProcessingScripts.process_utilities) check_format() (in module PICOcode.DataHandling.write_reconfile) check_processing() (in module PICOcode.ProcessingScripts.process_single_run)

check_tar_and_extract() (in module PICOcode.ProcessingScripts.process_utilities) check_valid_config() (ProcessConfig method) concat_files() (in module PICOcode.ProcessingScripts.concat_files) Config (class in PICOcode.DataHandling.config) convert_abub() (in module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22) convert_recon_2_to_1() (DatasetProcessorBase static method)

D

daq_version() (in module PICOcode.ProcessingScripts.process_utilities) data_size (BinaryData attribute) dataset_acoustic_l2() (in module PICOcode.ProcessingScripts.process_functions) dataset_concatenate_files() (in module PICOcode.ProcessingScripts.process_functions) dataset_concatenate_files_from_zip() (in module PICOcode.ProcessingScripts.process_functions) dataset_convert_to_root() (in module PICOcode.ProcessingScripts.process_functions) dataset_dytran_l2() (in module PICOcode.ProcessingScripts.process_functions) dataset_full_merge() (in module PICOcode.ProcessingScripts.process_functions) dataset_handscanning() (in module PICOcode.ProcessingScripts.process_functions) dataset_pickle() (in module PICOcode.ProcessingScripts.process_functions) dataset_processor() (in module PICOcode.ProcessingScripts.process_functions)

dataset_prune_merge() (in module PICOcode.ProcessingScripts.process_functions) dataset_run_summary() (in module PICOcode.ProcessingScripts.process_functions) dataset_scan_missing_files() (in module PICOcode.ProcessingScripts.process_functions) dataset_submit_grid_jobs() (in module PICOcode.ProcessingScripts.process_functions) dataset_wait_for_grid_jobs() (in module PICOcode.ProcessingScripts.process_functions) dataset_write_constants() (in module PICOcode.ProcessingScripts.process_functions) dataset_zip_and_clean() (in module PICOcode.ProcessingScripts.process_functions) DatasetProcessor (class in PICOcode.ProcessingScripts.process_runs) DatasetProcessorBase (class in PICOcode.AnalysisModules.dataset_modules.dataset_processor_base) DytranAnalysis (class in PICOcode.AnalysisModules.event_modules.pico40l_22.dytran_analysis) DytranAnalysisBase (class in PICOcode.AnalysisModules.event_modules.dytran_analysis)

E

end_of_file() (BinaryData method) enqueue() (DatasetProcessorBase method) (HandscanningDataBase method) (Level2AcousticAnalysisBase method) (Level2DytranAnalysisBase method) (ProcessorBase method)

Event (class in PICOcode.DataHandling.GetEvent), [1] EventProcessor (class in PICOcode.ProcessingScripts.process_tasks)

F

FastDAQAnalysis (class in PICOcode.AnalysisModules.event_modules.pico40l_22.fastdaq_analysis) FastDAQAnalysisBase (class in PICOcode.AnalysisModules.event_modules.fastdaq_analysis) fetch() (GitUpdater method) find_t0() (DytranAnalysisBase method) fit_dytran() (DytranAnalysisBase method)

fit_dytran_heaviQuad() (DytranAnalysisBase method) fit_dytran_new() (DytranAnalysisBase method) fit_dytran_v2() (DytranAnalysis method) format_map (BinaryData attribute) format_output() (DatasetProcessorBase method) (ProcessorBase method)

G

get_bulk_events() (in module PICOcode.AnalysisModules.pico40l_cuts) get_camdata_data() (Loader method) get_commit_hash() (GitUpdater method) get_daqsettings_data() (Loader method) (RawLoader method) (ZipLoader method) get_data_series() (in module PICOcode.ProcessingScripts.process_utilities) get_default_config() (in module PICOcode.DataHandling.Utilities) get_dytran_list() (DytranAnalysisBase method) get_event_data() (Loader method) (RawLoader method) (ZipLoader method) get_fastdaq_cal_data() (Loader method) (RawLoader method) (ZipLoader method) get_fastdaq_data() (Loader method) (RawLoader method) (ZipLoader method) get_fmt_str() (in module PICOcode.DataHandling.Utilities) get_image_data() (RawLoader method) (ZipLoader method)

get_loader() (in module PICOcode.DataHandling.Loaders) get_multiples_events() (in module PICOcode.AnalysisModules.pico40l_cuts) get_plc_data() (Loader method) (RawLoader method) (ZipLoader method) get_recon_file() (ZipLoader method) get_rundata_data() (Loader method) (RawLoader method) (ZipLoader method) get_singles_events() (in module PICOcode.AnalysisModules.pico40l_cuts) get_slowdaq_data() (Loader method) (RawLoader method) (ZipLoader method) get_temperature_data() (Loader method) (RawLoader method) (ZipLoader method) get_type() (in module PICOcode.DataHandling.Utilities) get_type_root() (in module PICOcode.DataHandling.Utilities) get_wall_events() (in module PICOcode.AnalysisModules.pico40l_cuts) GetHistory (class in PICOcode.AnalysisModules.event_modules.pico40l_22.get_history) GetHistoryBase (class in PICOcode.AnalysisModules.event_modules.get_history) GitUpdater (class in PICOcode.ProcessingScripts.git_updater)

H

HandscanningDataBase (class in PICOcode.AnalysisModules.dataset_modules.handscanning_data)

HeaviQuad() (DytranAnalysisBase static method)

L

Level2AcousticAnalysisBase (class in PICOcode.AnalysisModules.dataset_modules.level2_acoustic_analysis) Level2DytranAnalysisBase (class in PICOcode.AnalysisModules.dataset_modules.level2_dytran_analysis) listener() (in module PICOcode.ProcessingScripts.process_single_run) Loader (class in PICOcode.DataHandling.Loaders)

LoadoptError LoadReconFile (in module PICOcode.DataHandling) LoadReconFile() (in module PICOcode.DataHandling.LoadReconFile) LocateNearestPass() (in module PICOcode.AnalysisModules.run_modules.XYZlookup) LUT_index() (BinaryLUT method)

M

make_default_config() (in module PICOcode.DataHandling.Utilities) matcher (ZipLoader attribute) merge_files() (in module PICOcode.ProcessingScripts.merge_files) module PICOcode PICOcode.AnalysisModules PICOcode.AnalysisModules.dataset_modules PICOcode.AnalysisModules.dataset_modules.dataset_processor_base PICOcode.AnalysisModules.dataset_modules.handscanning_data PICOcode.AnalysisModules.dataset_modules.level2_acoustic_analysis PICOcode.AnalysisModules.dataset_modules.level2_dytran_analysis PICOcode.AnalysisModules.event_modules PICOcode.AnalysisModules.event_modules.dytran_analysis PICOcode.AnalysisModules.event_modules.fastdaq_analysis PICOcode.AnalysisModules.event_modules.get_history PICOcode.AnalysisModules.event_modules.pico40l_22 PICOcode.AnalysisModules.event_modules.pico40l_22.dytran_analysis PICOcode.AnalysisModules.event_modules.pico40l_22.fastdaq_analysis PICOcode.AnalysisModules.event_modules.pico40l_22.get_history PICOcode.AnalysisModules.event_modules.processor_base PICOcode.AnalysisModules.pico40l_cuts PICOcode.AnalysisModules.run_modules PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21 PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19 PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22 PICOcode.AnalysisModules.run_modules.XYZlookup PICOcode.DataHandling PICOcode.DataHandling.BinaryData PICOcode.DataHandling.BinaryLUT PICOcode.DataHandling.config PICOcode.DataHandling.GetEvent PICOcode.DataHandling.Loaders PICOcode.DataHandling.LoadReconFile PICOcode.DataHandling.Utilities PICOcode.DataHandling.write_reconfile PICOcode.DataHandling.XMLhelper PICOcode.ProcessingScripts PICOcode.ProcessingScripts.concat_files PICOcode.ProcessingScripts.git_updater PICOcode.ProcessingScripts.merge_files PICOcode.ProcessingScripts.process_functions PICOcode.ProcessingScripts.process_runs PICOcode.ProcessingScripts.process_single_run PICOcode.ProcessingScripts.process_single_run_rewrite PICOcode.ProcessingScripts.process_tasks PICOcode.ProcessingScripts.process_utilities PICOcode.ProcessingScripts.skip_runs PICOcode.ProcessingScripts.skip_runs_40l_19 PICOcode.ProcessingScripts.skip_runs_40l_22

N

num_missing_DAQ_file_lines() (in module PICOcode.ProcessingScripts.merge_files)

num_too_many_DAQ_file_lines() (in module PICOcode.ProcessingScripts.merge_files)

O

open_run_archive() (Event method)

P

parse() (in module PICOcode.DataHandling.Utilities) ParseData() (ReconFile method) PICOcode module PICOcode.AnalysisModules module PICOcode.AnalysisModules.dataset_modules module PICOcode.AnalysisModules.dataset_modules.dataset_processor_base module PICOcode.AnalysisModules.dataset_modules.handscanning_data module PICOcode.AnalysisModules.dataset_modules.level2_acoustic_analysis module PICOcode.AnalysisModules.dataset_modules.level2_dytran_analysis module PICOcode.AnalysisModules.event_modules module PICOcode.AnalysisModules.event_modules.dytran_analysis module PICOcode.AnalysisModules.event_modules.fastdaq_analysis module PICOcode.AnalysisModules.event_modules.get_history module PICOcode.AnalysisModules.event_modules.pico40l_22 module PICOcode.AnalysisModules.event_modules.pico40l_22.dytran_analysis module PICOcode.AnalysisModules.event_modules.pico40l_22.fastdaq_analysis module PICOcode.AnalysisModules.event_modules.pico40l_22.get_history module PICOcode.AnalysisModules.event_modules.processor_base module PICOcode.AnalysisModules.pico40l_cuts module PICOcode.AnalysisModules.run_modules module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21 module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19 module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22 module PICOcode.AnalysisModules.run_modules.XYZlookup module PICOcode.DataHandling module PICOcode.DataHandling.BinaryData module PICOcode.DataHandling.BinaryLUT module

PICOcode.DataHandling.config module PICOcode.DataHandling.GetEvent module PICOcode.DataHandling.Loaders module PICOcode.DataHandling.LoadReconFile module PICOcode.DataHandling.Utilities module PICOcode.DataHandling.write_reconfile module PICOcode.DataHandling.XMLhelper module PICOcode.ProcessingScripts module PICOcode.ProcessingScripts.concat_files module PICOcode.ProcessingScripts.git_updater module PICOcode.ProcessingScripts.merge_files module PICOcode.ProcessingScripts.process_functions module PICOcode.ProcessingScripts.process_runs module PICOcode.ProcessingScripts.process_single_run module PICOcode.ProcessingScripts.process_single_run_rewrite module PICOcode.ProcessingScripts.process_tasks module PICOcode.ProcessingScripts.process_utilities module PICOcode.ProcessingScripts.skip_runs module PICOcode.ProcessingScripts.skip_runs_40l_19 module PICOcode.ProcessingScripts.skip_runs_40l_22 module prep_regex() (in module PICOcode.DataHandling.Utilities) process_single_event() (in module PICOcode.ProcessingScripts.process_single_run) process_single_run() (in module PICOcode.ProcessingScripts.process_single_run) ProcessConfig (class in PICOcode.ProcessingScripts.process_single_run_rewrite) ProcessedEvent (class in PICOcode.ProcessingScripts.process_single_run) ProcessorBase (class in PICOcode.AnalysisModules.event_modules.processor_base) ProcessRuns (class in PICOcode.ProcessingScripts.process_runs) ProcessSingleEvent (class in PICOcode.ProcessingScripts.process_single_run_rewrite) ProcessSingleRun (class in PICOcode.ProcessingScripts.process_single_run_rewrite) Property (class in PICOcode.DataHandling.GetEvent) pull() (GitUpdater method)

Q

QuartFit() (DytranAnalysisBase static method)

R

RawLoader (class in PICOcode.DataHandling.Loaders) read_config() (in module PICOcode.DataHandling.Utilities) read_data() (BinaryData method) (BinaryLUT method) read_from() (Config method) read_header() (BinaryData method) ReadAsciiFile() (ReconFile method) ReadRootFile() (ReconFile method) ReadSerializedData() (ReconFile method) ReconFile (class in PICOcode.DataHandling.LoadReconFile) ReconFileWriter (class in PICOcode.DataHandling.write_reconfile) rename_bbub_to_abub() (in module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22) run() (DatasetProcessorBase method) (DytranAnalysis method) (DytranAnalysisBase method) (FastDAQAnalysis method) (FastDAQAnalysisBase method) (GetHistory method) (GetHistoryBase method) (HandscanningDataBase method) (Level2AcousticAnalysisBase method) (Level2DytranAnalysisBase method) (ProcessorBase method)

run_abub() (in module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22) run_handscan() (in module PICOcode.ProcessingScripts.process_single_run) run_jar_tracker() (in module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22) run_merge() (in module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22) run_merge2() (in module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22) run_processor() (in module PICOcode.ProcessingScripts.process_single_run) run_root_conversion() (in module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22) run_xyz_l1() (in module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22) run_xyz_l2() (in module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22) RunProcessor (class in PICOcode.ProcessingScripts.process_tasks)

S

SaveSerializedData() (ReconFile method) set_binary_file() (BinaryData method) set_file_name() (BinaryData method) set_header() (ReconFileWriter method) setup_logger() (in module PICOcode.ProcessingScripts.process_utilities)

Singleton (class in PICOcode.DataHandling.config) StripMetadata() (ReconFile method) submit_slurm_job() (in module PICOcode.ProcessingScripts.process_utilities) sum_dytran() (DytranAnalysisBase method) switch_branch() (GitUpdater method)

T

tar_fast_plots() (in module PICOcode.AnalysisModules.run_modules.run_level_processing_01l_21) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_19) (in module PICOcode.AnalysisModules.run_modules.run_level_processing_40l_22)

TarLoader (class in PICOcode.DataHandling.Loaders)

U

update_config() (in module PICOcode.DataHandling.Utilities)

V

verify_config() (in module PICOcode.DataHandling.Utilities)

W

write_ascii() (ReconFileWriter method) write_banner() (in module PICOcode.ProcessingScripts.process_utilities)

write_binary_reconfile() (BinaryData method) write_reconfile() (in module PICOcode.DataHandling.write_reconfile) write_to() (Config method)

X

XML2dict() (in module PICOcode.DataHandling.XMLhelper)

XMLparser() (in module PICOcode.DataHandling.XMLhelper) XYZlookup() (in module PICOcode.AnalysisModules.run_modules.XYZlookup)

Z

ZipLoader (class in PICOcode.DataHandling.Loaders)